Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836199.1_cds_XP_016506240.1_19487
CDS Infomation

[gene=LOC107824029] [db_xref=GeneID:107824029] [protein=la-related protein 1C-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016506240.1] [location=complement(join(<554..644,746..890,975..1557,2113..2646))] [gbkey=CDS]
Sequence

ATGGCTGCACCGGCTCCAACTTCAGCTCATCATTCTCACCGGAATACCACCTCGGAAACC
GGCAGCAGCACCGACGCCGGTGGTCTCAACAGCCCCCAGTCTCGGCGATCATCAGCCGCT
GCGCGTGGTGTTTCCTCGGCTTGGACGCAGATTGTTCGCAGCAGCGACTCAGAATCCACA
GTTGTGTCGATTTCCTCTTCACCTCCTCTTCCTCCTCCACTTTCTCCTCCGGCGTATTCT
GAGCAAATCGTTCACTCCTCTGATTGTTCGCTTTCTGATGACGGGGCGACAGCCGGTAGT
GCTGCTACAGAAGCTCAGCTTGAGAGCTCTGATAACGGAAACAGCGATGGCAGCAACAGC
AATGTGGCTAAAAAGCCCGCCTGGAACAAACCGTTAAATGGTGCAGCTGAGGTTAGTCCA
GTCATGGGTGCTGTCTGTTGGCCTGCTCTCTCCGATTCCACTAAGGCTTCACCAAAATCG
TCTTCTTCCGAGTCACTCAAAGCTCTCTCCGACGTATCAGTTTCTGTAACACAGGGAACG
GGAATGACATCATCTTCTCATGGGCAAGCTAATACGAACAATGCGAACCCTAATTCAACG
CTGAACCATGTTGCTCCCACCCGCCAAAGGTCTATGAAGCGCGGTGGTGGTTATTCAAAC
CATAATGCATCAGCCAATGGTGGTTTTTCTCAGCAACAGGGGCAGAGTTCTGAGGTGGAA
ATAGTCCTTAATAAATCTGGGAAGTCCGGTAATTCTGGTGCTGATTCATCTTCAAAGGAT
AATAGTCATAGGGATGGTGGACAATGGGGAGGATTTGGATCTCAATCACATGGTGGAAAT
GAGCACCAACATCAACGAAATTCAAACAGGAGAGGCAATGTTGGTCCACACCCCCGTGGA
GATGGCACGCATCATCAAGGTTATGGGGGTAGGCGTGATCAGGAACGTGGAAATCAGGAT
TGGAAACCCCACAGAGGTTGGGGGAATAGGGATGCACACATGCAGCCGCAGAGAGTTCCA
GCGAGGCCATTTATGGGAGGCCCACCTCATACTTCCCCACCTTTTATACCTCCAACCATG
CCTGTGCAGCCCTATCGAGCTCCCATGGTTTACTCTGAGGTACCACCTGTATATTTTTTT
CCAGGTCCACTCCCTGATACATTCAGAATGCCTATGCTTTCTCCTGTGCCACCTGTCTTC
TTTCATATGCCAGATCCCCAGTTGCAAACCAAAATAGTGAACCAGATAGATTATTATTTC
AGTAATGAAAATTTGATTAAGGATACATTCTTGCGGCGGAACATGGATGAACATGGATGG
GTTTCTGTTACGCTAATAGCAGGCTTCAAGAAA

Peptide Sequence

PEP ID

XP_016506240.1
PEP Infomation

PREDICTED: la-related protein 1C-like [Nicotiana tabacum]
Sequence

MAAPAPTSAHHSHRNTTSETGSSTDAGGLNSPQSRRSSAAARGVSSAWTQIVRSSDSEST
VVSISSSPPLPPPLSPPAYSEQIVHSSDCSLSDDGATAGSAATEAQLESSDNGNSDGSNS
NVAKKPAWNKPLNGAAEVSPVMGAVCWPALSDSTKASPKSSSSESLKALSDVSVSVTQGT
GMTSSSHGQANTNNANPNSTLNHVAPTRQRSMKRGGGYSNHNASANGGFSQQQGQSSEVE
IVLNKSGKSGNSGADSSSKDNSHRDGGQWGGFGSQSHGGNEHQHQRNSNRRGNVGPHPRG
DGTHHQGYGGRRDQERGNQDWKPHRGWGNRDAHMQPQRVPARPFMGGPPHTSPPFIPPTM
PVQPYRAPMVYSEVPPVYFFPGPLPDTFRMPMLSPVPPVFFHMPDPQLQTKIVNQIDYYF
SNENLIKDTFLRRNMDEHGWVSVTLIAGFKKVMSLTDNIQLILDVMRSSTAVEVQGEKLR
RRNDWNRWLIPPSVQNSTMSGPQSPQKYSPDLLAENLQRVTFDDKTTRRGTAEAYHSRSS
SVELSTPSERFGNEMGGQAGAQHVQPMPVENPSKRVYCSVVE

Transcript Sequence

Gene sequence data has not been registered.